Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hspg2Q05793 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.88□□□□□ -0.51
Hspg2Q05793 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Gm5312-201ENSMUST00000203728 547 ntBASIC11.88□□□□□ -0.51
Hspg2Q05793 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.88□□□□□ -0.51
Hspg2Q05793 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Gm9172-201ENSMUST00000212092 954 ntBASIC11.88□□□□□ -0.51
Hspg2Q05793 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.88□□□□□ -0.51
Hspg2Q05793 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hspg2Q05793 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hspg2Q05793 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Hspg2Q05793 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Hspg2Q05793 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.87□□□□□ -0.51
Hspg2Q05793 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.87□□□□□ -0.51
Hspg2Q05793 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hspg2Q05793 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.87□□□□□ -0.51
Hspg2Q05793 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hspg2Q05793 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hspg2Q05793 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hspg2Q05793 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.86□□□□□ -0.51
Hspg2Q05793 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.86□□□□□ -0.51
Hspg2Q05793 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Hspg2Q05793 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Gm44335-201ENSMUST00000196879 141 ntBASIC11.86□□□□□ -0.51
Hspg2Q05793 Gm44297-201ENSMUST00000198304 141 ntBASIC11.86□□□□□ -0.51
Hspg2Q05793 Gm44346-201ENSMUST00000198851 141 ntBASIC11.86□□□□□ -0.51
Hspg2Q05793 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.86□□□□□ -0.51
Hspg2Q05793 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.86□□□□□ -0.51
Hspg2Q05793 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.86□□□□□ -0.51
Hspg2Q05793 Mir6990-201ENSMUST00000183724 91 ntBASIC11.86□□□□□ -0.51
Hspg2Q05793 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.86□□□□□ -0.51
Hspg2Q05793 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hspg2Q05793 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.86□□□□□ -0.51
Hspg2Q05793 Gm18889-201ENSMUST00000174284 929 ntBASIC11.86□□□□□ -0.51
Hspg2Q05793 Gm27301-201ENSMUST00000184012 127 ntBASIC11.86□□□□□ -0.51
Hspg2Q05793 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hspg2Q05793 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hspg2Q05793 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Hspg2Q05793 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.85□□□□□ -0.51
Hspg2Q05793 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hspg2Q05793 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.85□□□□□ -0.51
Hspg2Q05793 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hspg2Q05793 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms