Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.63■□□□□ 0.41
Trim43cP86449 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim43cP86449 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Trim43cP86449 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.63■□□□□ 0.41
Trim43cP86449 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim43cP86449 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.63■□□□□ 0.41
Trim43cP86449 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim43cP86449 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim43cP86449 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Trim43cP86449 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.62■□□□□ 0.41
Trim43cP86449 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim43cP86449 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Trim43cP86449 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim43cP86449 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Dancr-204ENSMUST00000132389 2347 ntBASIC17.61■□□□□ 0.41
Trim43cP86449 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim43cP86449 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim43cP86449 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim43cP86449 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trim43cP86449 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Gm27742-201ENSMUST00000184667 60 ntBASIC17.61■□□□□ 0.41
Trim43cP86449 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim43cP86449 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim43cP86449 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim43cP86449 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim43cP86449 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.6■□□□□ 0.41
Trim43cP86449 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Trim43cP86449 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trim43cP86449 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.6■□□□□ 0.41
Trim43cP86449 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim43cP86449 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.6■□□□□ 0.41
Trim43cP86449 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim43cP86449 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim43cP86449 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim43cP86449 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim43cP86449 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trim43cP86449 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim43cP86449 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim43cP86449 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Trim43cP86449 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms