Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ThraP63058 Mir770-201ENSMUST00000103252 94 ntBASIC16.41■□□□□ 0.22
ThraP63058 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ThraP63058 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ThraP63058 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ThraP63058 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ThraP63058 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ThraP63058 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ThraP63058 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.4■□□□□ 0.22
ThraP63058 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.4■□□□□ 0.22
ThraP63058 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ThraP63058 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ThraP63058 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.4■□□□□ 0.22
ThraP63058 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
ThraP63058 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ThraP63058 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
ThraP63058 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ThraP63058 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ThraP63058 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.39■□□□□ 0.21
ThraP63058 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ThraP63058 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ThraP63058 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.39■□□□□ 0.21
ThraP63058 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ThraP63058 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ThraP63058 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ThraP63058 Gm27357-201ENSMUST00000183754 135 ntBASIC16.39■□□□□ 0.21
ThraP63058 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.39■□□□□ 0.21
ThraP63058 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ThraP63058 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ThraP63058 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
ThraP63058 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ThraP63058 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
ThraP63058 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
ThraP63058 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ThraP63058 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ThraP63058 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ThraP63058 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ThraP63058 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
ThraP63058 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.38■□□□□ 0.21
ThraP63058 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ThraP63058 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.38■□□□□ 0.21
ThraP63058 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ThraP63058 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.37■□□□□ 0.21
ThraP63058 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ThraP63058 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Mir3081-201ENSMUST00000175305 84 ntBASIC16.37■□□□□ 0.21
ThraP63058 Gm27742-201ENSMUST00000184667 60 ntBASIC16.37■□□□□ 0.21
ThraP63058 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.37■□□□□ 0.21
ThraP63058 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.37■□□□□ 0.21
ThraP63058 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.37■□□□□ 0.21
ThraP63058 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ThraP63058 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.37■□□□□ 0.21
ThraP63058 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
ThraP63058 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ThraP63058 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms