Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sf3b6P59708 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.4□□□□□ -0.1
Sf3b6P59708 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.4□□□□□ -0.1
Sf3b6P59708 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.4□□□□□ -0.1
Sf3b6P59708 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sf3b6P59708 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Sf3b6P59708 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Sf3b6P59708 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sf3b6P59708 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b6P59708 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.39□□□□□ -0.11
Sf3b6P59708 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Gm18958-201ENSMUST00000174258 762 ntBASIC14.39□□□□□ -0.11
Sf3b6P59708 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b6P59708 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3b6P59708 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3b6P59708 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.38□□□□□ -0.11
Sf3b6P59708 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Sf3b6P59708 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.38□□□□□ -0.11
Sf3b6P59708 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3b6P59708 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b6P59708 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.37□□□□□ -0.11
Sf3b6P59708 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sf3b6P59708 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.37□□□□□ -0.11
Sf3b6P59708 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Sf3b6P59708 Mir1199-201ENSMUST00000117015 119 ntBASIC14.37□□□□□ -0.11
Sf3b6P59708 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.37□□□□□ -0.11
Sf3b6P59708 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b6P59708 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sf3b6P59708 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sf3b6P59708 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms