Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ctdsp1P58466 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.74□□□□□ -0.37
Ctdsp1P58466 App-207ENSMUST00000227737 2827 ntBASIC12.74□□□□□ -0.37
Ctdsp1P58466 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.73□□□□□ -0.37
Ctdsp1P58466 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Phf7-203ENSMUST00000226565 1971 ntBASIC12.73□□□□□ -0.37
Ctdsp1P58466 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ctdsp1P58466 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Gm12922-201ENSMUST00000120626 809 ntBASIC12.72□□□□□ -0.37
Ctdsp1P58466 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ctdsp1P58466 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.71□□□□□ -0.37
Ctdsp1P58466 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ctdsp1P58466 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ctdsp1P58466 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ctdsp1P58466 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ctdsp1P58466 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ctdsp1P58466 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ctdsp1P58466 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ctdsp1P58466 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ctdsp1P58466 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ctdsp1P58466 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms