Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.44■□□□□ 0.38
Nub1P54729 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.44■□□□□ 0.38
Nub1P54729 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nub1P54729 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nub1P54729 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.43■□□□□ 0.38
Nub1P54729 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.43■□□□□ 0.38
Nub1P54729 Gm33142-201ENSMUST00000193913 867 ntBASIC17.43■□□□□ 0.38
Nub1P54729 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.43■□□□□ 0.38
Nub1P54729 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Nub1P54729 Gm45328-201ENSMUST00000210942 917 ntBASIC17.43■□□□□ 0.38
Nub1P54729 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.43■□□□□ 0.38
Nub1P54729 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nub1P54729 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nub1P54729 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.42■□□□□ 0.38
Nub1P54729 Gm15794-201ENSMUST00000120182 631 ntBASIC17.42■□□□□ 0.38
Nub1P54729 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Nub1P54729 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nub1P54729 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nub1P54729 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
Nub1P54729 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nub1P54729 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nub1P54729 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.41■□□□□ 0.38
Nub1P54729 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.41■□□□□ 0.38
Nub1P54729 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Nub1P54729 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.41■□□□□ 0.38
Nub1P54729 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Nub1P54729 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nub1P54729 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.41■□□□□ 0.38
Nub1P54729 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.41■□□□□ 0.38
Nub1P54729 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nub1P54729 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Nub1P54729 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.4■□□□□ 0.38
Nub1P54729 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nub1P54729 Gm27704-201ENSMUST00000185094 107 ntBASIC17.4■□□□□ 0.38
Nub1P54729 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.4■□□□□ 0.38
Nub1P54729 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Nub1P54729 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nub1P54729 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.4■□□□□ 0.38
Nub1P54729 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms