Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cacnb3P54285 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacnb3P54285 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacnb3P54285 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacnb3P54285 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacnb3P54285 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacnb3P54285 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.85■□□□□ 0.61
Cacnb3P54285 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cacnb3P54285 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.85■□□□□ 0.61
Cacnb3P54285 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Gm23935-201ENSMUST00000102303 57 ntBASIC18.85■□□□□ 0.61
Cacnb3P54285 Gm24270-201ENSMUST00000102326 57 ntBASIC18.85■□□□□ 0.61
Cacnb3P54285 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.85■□□□□ 0.61
Cacnb3P54285 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.85■□□□□ 0.61
Cacnb3P54285 Gm24245-201ENSMUST00000157318 57 ntBASIC18.85■□□□□ 0.61
Cacnb3P54285 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.85■□□□□ 0.61
Cacnb3P54285 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.85■□□□□ 0.61
Cacnb3P54285 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cacnb3P54285 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cacnb3P54285 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacnb3P54285 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Gm14822-201ENSMUST00000122247 291 ntBASIC18.84■□□□□ 0.61
Cacnb3P54285 Gm6736-201ENSMUST00000166583 948 ntBASIC18.84■□□□□ 0.61
Cacnb3P54285 Mir6404-201ENSMUST00000183699 94 ntBASIC18.84■□□□□ 0.61
Cacnb3P54285 Gm27646-201ENSMUST00000183989 110 ntBASIC18.84■□□□□ 0.61
Cacnb3P54285 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Gm18622-201ENSMUST00000219361 595 ntBASIC18.84■□□□□ 0.61
Cacnb3P54285 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.84■□□□□ 0.61
Cacnb3P54285 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacnb3P54285 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Cacnb3P54285 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacnb3P54285 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cacnb3P54285 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacnb3P54285 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cacnb3P54285 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacnb3P54285 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb3P54285 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb3P54285 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.83■□□□□ 0.6
Cacnb3P54285 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.83■□□□□ 0.6
Cacnb3P54285 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb3P54285 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb3P54285 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb3P54285 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb3P54285 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb3P54285 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb3P54285 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacnb3P54285 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Cacnb3P54285 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cacnb3P54285 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.82■□□□□ 0.6
Cacnb3P54285 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.82■□□□□ 0.6
Cacnb3P54285 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cacnb3P54285 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Cacnb3P54285 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacnb3P54285 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms