Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gli1P47806 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gli1P47806 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gli1P47806 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gli1P47806 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gli1P47806 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Gli1P47806 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.84■□□□□ 0.13
Gli1P47806 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.84■□□□□ 0.13
Gli1P47806 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.84■□□□□ 0.13
Gli1P47806 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.84■□□□□ 0.13
Gli1P47806 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.84■□□□□ 0.13
Gli1P47806 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gli1P47806 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gli1P47806 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gli1P47806 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.83■□□□□ 0.13
Gli1P47806 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Gli1P47806 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gli1P47806 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gli1P47806 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Gli1P47806 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gli1P47806 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gli1P47806 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gli1P47806 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gli1P47806 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Gm25016-201ENSMUST00000158399 131 ntBASIC15.83■□□□□ 0.12
Gli1P47806 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Gm37025-201ENSMUST00000195159 829 ntBASIC15.83■□□□□ 0.12
Gli1P47806 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.83■□□□□ 0.12
Gli1P47806 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Gli1P47806 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Gli1P47806 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Gli1P47806 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gli1P47806 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Gli1P47806 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.82■□□□□ 0.12
Gli1P47806 Gm7284-201ENSMUST00000131667 944 ntBASIC15.82■□□□□ 0.12
Gli1P47806 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.82■□□□□ 0.12
Gli1P47806 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.82■□□□□ 0.12
Gli1P47806 Gm27000-201ENSMUST00000182943 842 ntBASIC15.82■□□□□ 0.12
Gli1P47806 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Gli1P47806 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Gli1P47806 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Gli1P47806 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Gli1P47806 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Gli1P47806 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.82■□□□□ 0.12
Gli1P47806 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gli1P47806 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Gli1P47806 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gli1P47806 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gli1P47806 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gli1P47806 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Gli1P47806 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gli1P47806 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gli1P47806 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.81■□□□□ 0.12
Gli1P47806 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gli1P47806 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Gli1P47806 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.81■□□□□ 0.12
Gli1P47806 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gli1P47806 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Gli1P47806 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Gli1P47806 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gli1P47806 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.81■□□□□ 0.12
Gli1P47806 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.81■□□□□ 0.12
Gli1P47806 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms