Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.67■□□□□ 0.26
Cxcl12P40224 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.67■□□□□ 0.26
Cxcl12P40224 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cxcl12P40224 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cxcl12P40224 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.67■□□□□ 0.26
Cxcl12P40224 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cxcl12P40224 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.66■□□□□ 0.26
Cxcl12P40224 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Mir7023-201ENSMUST00000185093 64 ntBASIC16.66■□□□□ 0.26
Cxcl12P40224 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cxcl12P40224 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cxcl12P40224 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.66■□□□□ 0.26
Cxcl12P40224 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cxcl12P40224 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Cxcl12P40224 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.65■□□□□ 0.26
Cxcl12P40224 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.65■□□□□ 0.26
Cxcl12P40224 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cxcl12P40224 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.65■□□□□ 0.26
Cxcl12P40224 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.65■□□□□ 0.26
Cxcl12P40224 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.65■□□□□ 0.26
Cxcl12P40224 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.65■□□□□ 0.26
Cxcl12P40224 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cxcl12P40224 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.64■□□□□ 0.25
Cxcl12P40224 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cxcl12P40224 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cxcl12P40224 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm5745-201ENSMUST00000183748 313 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm17968-201ENSMUST00000194902 784 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm44335-201ENSMUST00000196879 141 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm43438-201ENSMUST00000198133 379 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm44297-201ENSMUST00000198304 141 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm44346-201ENSMUST00000198851 141 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.64■□□□□ 0.25
Cxcl12P40224 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cxcl12P40224 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cxcl12P40224 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cxcl12P40224 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl12P40224 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.63■□□□□ 0.25
Cxcl12P40224 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cxcl12P40224 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Cxcl12P40224 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms