Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Slc6a13P31649 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a13P31649 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a13P31649 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.45■□□□□ 0.22
Slc6a13P31649 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a13P31649 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Slc6a13P31649 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.45■□□□□ 0.22
Slc6a13P31649 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.45■□□□□ 0.22
Slc6a13P31649 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a13P31649 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a13P31649 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.45■□□□□ 0.22
Slc6a13P31649 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Slc6a13P31649 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc6a13P31649 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.44■□□□□ 0.22
Slc6a13P31649 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.44■□□□□ 0.22
Slc6a13P31649 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.44■□□□□ 0.22
Slc6a13P31649 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.44■□□□□ 0.22
Slc6a13P31649 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.44■□□□□ 0.22
Slc6a13P31649 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slc6a13P31649 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
Slc6a13P31649 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a13P31649 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.43■□□□□ 0.22
Slc6a13P31649 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.43■□□□□ 0.22
Slc6a13P31649 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Slc6a13P31649 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Slc6a13P31649 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.43■□□□□ 0.22
Slc6a13P31649 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Slc6a13P31649 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a13P31649 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc6a13P31649 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc6a13P31649 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a13P31649 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a13P31649 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a13P31649 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc6a13P31649 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a13P31649 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a13P31649 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Slc6a13P31649 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.41■□□□□ 0.22
Slc6a13P31649 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms