Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Irf8P23611 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.48■□□□□ 0.39
Irf8P23611 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.48■□□□□ 0.39
Irf8P23611 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.48■□□□□ 0.39
Irf8P23611 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Irf8P23611 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.48■□□□□ 0.39
Irf8P23611 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.48■□□□□ 0.39
Irf8P23611 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.48■□□□□ 0.39
Irf8P23611 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Irf8P23611 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Irf8P23611 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.48■□□□□ 0.39
Irf8P23611 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf8P23611 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Irf8P23611 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.47■□□□□ 0.39
Irf8P23611 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.47■□□□□ 0.39
Irf8P23611 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Irf8P23611 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.47■□□□□ 0.39
Irf8P23611 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.47■□□□□ 0.39
Irf8P23611 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.47■□□□□ 0.39
Irf8P23611 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.47■□□□□ 0.39
Irf8P23611 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.47■□□□□ 0.39
Irf8P23611 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.47■□□□□ 0.39
Irf8P23611 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf8P23611 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Irf8P23611 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Irf8P23611 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.46■□□□□ 0.39
Irf8P23611 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Irf8P23611 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.46■□□□□ 0.39
Irf8P23611 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.46■□□□□ 0.39
Irf8P23611 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Irf8P23611 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf8P23611 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Irf8P23611 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Irf8P23611 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Irf8P23611 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Irf8P23611 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.45■□□□□ 0.38
Irf8P23611 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.45■□□□□ 0.38
Irf8P23611 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.45■□□□□ 0.38
Irf8P23611 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf8P23611 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.44■□□□□ 0.38
Irf8P23611 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms