Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccl1P10146 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccl1P10146 Gm18671-201ENSMUST00000214826 683 ntBASIC12.64□□□□□ -0.39
Ccl1P10146 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccl1P10146 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Ccl1P10146 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccl1P10146 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl1P10146 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccl1P10146 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccl1P10146 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccl1P10146 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Ccl1P10146 Asic1-205ENSMUST00000228185 1818 ntBASIC12.63□□□□□ -0.39
Ccl1P10146 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccl1P10146 Gm10033-202ENSMUST00000211874 928 ntBASIC12.63□□□□□ -0.39
Ccl1P10146 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccl1P10146 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccl1P10146 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl1P10146 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccl1P10146 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
Ccl1P10146 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccl1P10146 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Gm7290-201ENSMUST00000104990 617 ntBASIC12.62□□□□□ -0.39
Ccl1P10146 Gm15375-201ENSMUST00000119510 849 ntBASIC12.62□□□□□ -0.39
Ccl1P10146 Gm12918-201ENSMUST00000120234 636 ntBASIC12.62□□□□□ -0.39
Ccl1P10146 Gm15710-201ENSMUST00000121821 636 ntBASIC12.62□□□□□ -0.39
Ccl1P10146 Gm5075-201ENSMUST00000196916 622 ntBASIC12.62□□□□□ -0.39
Ccl1P10146 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.62□□□□□ -0.39
Ccl1P10146 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.62□□□□□ -0.39
Ccl1P10146 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl1P10146 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms