Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Gm7367-201ENSMUST00000057611 492 ntBASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp6P0C0A3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Gm11950-201ENSMUST00000121615 838 ntBASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Gm33142-201ENSMUST00000193913 867 ntBASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp6P0C0A3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp6P0C0A3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Gm14859-201ENSMUST00000117752 357 ntBASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Gm29707-201ENSMUST00000196325 491 ntBASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp6P0C0A3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp6P0C0A3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp6P0C0A3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp6P0C0A3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp6P0C0A3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp6P0C0A3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp6P0C0A3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms