Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.19■□□□□ 0.02
Sod1P08228 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.19■□□□□ 0.02
Sod1P08228 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sod1P08228 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sod1P08228 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sod1P08228 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sod1P08228 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Sod1P08228 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.19■□□□□ 0.02
Sod1P08228 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sod1P08228 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sod1P08228 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sod1P08228 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sod1P08228 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sod1P08228 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.18■□□□□ 0.02
Sod1P08228 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.18■□□□□ 0.02
Sod1P08228 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sod1P08228 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sod1P08228 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.18■□□□□ 0.02
Sod1P08228 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sod1P08228 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Sod1P08228 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.18■□□□□ 0.02
Sod1P08228 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.18■□□□□ 0.02
Sod1P08228 Gm37153-201ENSMUST00000193637 231 ntBASIC15.18■□□□□ 0.02
Sod1P08228 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sod1P08228 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sod1P08228 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sod1P08228 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sod1P08228 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.18■□□□□ 0.02
Sod1P08228 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.18■□□□□ 0.02
Sod1P08228 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sod1P08228 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Sod1P08228 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sod1P08228 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.17■□□□□ 0.02
Sod1P08228 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.17■□□□□ 0.02
Sod1P08228 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.17■□□□□ 0.02
Sod1P08228 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sod1P08228 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.17■□□□□ 0.02
Sod1P08228 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sod1P08228 Gm45167-201ENSMUST00000208007 322 ntBASIC15.17■□□□□ 0.02
Sod1P08228 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.17■□□□□ 0.02
Sod1P08228 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.17■□□□□ 0.02
Sod1P08228 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.17■□□□□ 0.02
Sod1P08228 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.17■□□□□ 0.02
Sod1P08228 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sod1P08228 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sod1P08228 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.16■□□□□ 0.02
Sod1P08228 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sod1P08228 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.16■□□□□ 0.02
Sod1P08228 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.16■□□□□ 0.02
Sod1P08228 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sod1P08228 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sod1P08228 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sod1P08228 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 Gm15358-201ENSMUST00000119249 520 ntBASIC15.15■□□□□ 0.02
Sod1P08228 Gm4899-201ENSMUST00000178708 719 ntBASIC15.15■□□□□ 0.02
Sod1P08228 Gm27300-201ENSMUST00000184085 97 ntBASIC15.15■□□□□ 0.02
Sod1P08228 Gm27335-201ENSMUST00000184758 97 ntBASIC15.15■□□□□ 0.02
Sod1P08228 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sod1P08228 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms