Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
P04224 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04224 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
P04224 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.27□□□□□ -0.12
P04224 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04224 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
P04224 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04224 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04224 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04224 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04224 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
P04224 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04224 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P04224 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P04224 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.27□□□□□ -0.12
P04224 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.27□□□□□ -0.13
P04224 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
P04224 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P04224 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P04224 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P04224 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.27□□□□□ -0.13
P04224 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P04224 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
P04224 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
P04224 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
P04224 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
P04224 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.26□□□□□ -0.13
P04224 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P04224 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.26□□□□□ -0.13
P04224 Gm12896-201ENSMUST00000118430 226 ntBASIC14.26□□□□□ -0.13
P04224 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P04224 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
P04224 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P04224 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
P04224 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P04224 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04224 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.25□□□□□ -0.13
P04224 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Dio3-201ENSMUST00000097228 1449 ntBASIC14.25□□□□□ -0.13
P04224 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Sybu-209ENSMUST00000228639 4113 ntBASIC14.25□□□□□ -0.13
P04224 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
P04224 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
P04224 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
P04224 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
P04224 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
P04224 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
P04224 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P04224 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
P04224 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04224 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04224 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
P04224 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04224 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04224 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P04224 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04224 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04224 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
P04224 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04224 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
P04224 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P04224 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms