Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vti1aO89116 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vti1aO89116 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.44■□□□□ 0.38
Vti1aO89116 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.44■□□□□ 0.38
Vti1aO89116 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Vti1aO89116 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vti1aO89116 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1aO89116 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1aO89116 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1aO89116 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1aO89116 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vti1aO89116 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.43■□□□□ 0.38
Vti1aO89116 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1aO89116 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1aO89116 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.43■□□□□ 0.38
Vti1aO89116 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.43■□□□□ 0.38
Vti1aO89116 Gm27867-201ENSMUST00000184778 125 ntBASIC17.43■□□□□ 0.38
Vti1aO89116 AW822252-206ENSMUST00000208904 237 ntBASIC17.43■□□□□ 0.38
Vti1aO89116 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.43■□□□□ 0.38
Vti1aO89116 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.43■□□□□ 0.38
Vti1aO89116 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1aO89116 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1aO89116 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vti1aO89116 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vti1aO89116 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Vti1aO89116 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.42■□□□□ 0.38
Vti1aO89116 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vti1aO89116 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Vti1aO89116 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.42■□□□□ 0.38
Vti1aO89116 Gm13312-201ENSMUST00000119631 718 ntBASIC17.42■□□□□ 0.38
Vti1aO89116 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.42■□□□□ 0.38
Vti1aO89116 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.42■□□□□ 0.38
Vti1aO89116 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Gm6376-201ENSMUST00000209407 580 ntBASIC17.42■□□□□ 0.38
Vti1aO89116 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vti1aO89116 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vti1aO89116 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.41■□□□□ 0.38
Vti1aO89116 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.41■□□□□ 0.38
Vti1aO89116 Rps4l-201ENSMUST00000071745 943 ntBASIC17.41■□□□□ 0.38
Vti1aO89116 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.41■□□□□ 0.38
Vti1aO89116 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vti1aO89116 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Vti1aO89116 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Vti1aO89116 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.4■□□□□ 0.38
Vti1aO89116 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Vti1aO89116 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Gm18206-201ENSMUST00000207027 926 ntBASIC17.4■□□□□ 0.38
Vti1aO89116 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.4■□□□□ 0.38
Vti1aO89116 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Vti1aO89116 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vti1aO89116 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms