Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.92■□□□□ 0.3
Yme1l1O88967 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Yme1l1O88967 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Yme1l1O88967 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.92■□□□□ 0.3
Yme1l1O88967 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.92■□□□□ 0.3
Yme1l1O88967 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Yme1l1O88967 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Yme1l1O88967 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Rarb-207ENSMUST00000225921 2756 ntBASIC16.91■□□□□ 0.3
Yme1l1O88967 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.91■□□□□ 0.3
Yme1l1O88967 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.91■□□□□ 0.3
Yme1l1O88967 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.91■□□□□ 0.3
Yme1l1O88967 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Yme1l1O88967 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
Yme1l1O88967 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.91■□□□□ 0.3
Yme1l1O88967 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Yme1l1O88967 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Yme1l1O88967 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Yme1l1O88967 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Yme1l1O88967 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.9■□□□□ 0.3
Yme1l1O88967 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.9■□□□□ 0.3
Yme1l1O88967 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.9■□□□□ 0.3
Yme1l1O88967 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.9■□□□□ 0.3
Yme1l1O88967 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.9■□□□□ 0.3
Yme1l1O88967 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.9■□□□□ 0.3
Yme1l1O88967 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.9■□□□□ 0.3
Yme1l1O88967 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.9■□□□□ 0.3
Yme1l1O88967 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Yme1l1O88967 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Yme1l1O88967 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.89■□□□□ 0.29
Yme1l1O88967 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.89■□□□□ 0.29
Yme1l1O88967 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.89■□□□□ 0.29
Yme1l1O88967 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.89■□□□□ 0.29
Yme1l1O88967 Gm18622-201ENSMUST00000219361 595 ntBASIC16.89■□□□□ 0.29
Yme1l1O88967 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Yme1l1O88967 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Yme1l1O88967 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Yme1l1O88967 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.88■□□□□ 0.29
Yme1l1O88967 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.88■□□□□ 0.29
Yme1l1O88967 Gm11764-201ENSMUST00000120221 623 ntBASIC16.88■□□□□ 0.29
Yme1l1O88967 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.88■□□□□ 0.29
Yme1l1O88967 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.88■□□□□ 0.29
Yme1l1O88967 Gm27646-201ENSMUST00000183989 110 ntBASIC16.88■□□□□ 0.29
Yme1l1O88967 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.88■□□□□ 0.29
Yme1l1O88967 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Yme1l1O88967 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms