Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.74■□□□□ 0.75
Cops6O88545 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm11594-201ENSMUST00000122313 162 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Cops6O88545 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm8825-201ENSMUST00000182565 998 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm4518-201ENSMUST00000182638 718 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm5264-201ENSMUST00000190584 848 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.74■□□□□ 0.75
Cops6O88545 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.74■□□□□ 0.75
Cops6O88545 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cops6O88545 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.74■□□□□ 0.75
Cops6O88545 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Cops6O88545 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops6O88545 Gm7222-201ENSMUST00000117512 906 ntBASIC19.73■□□□□ 0.75
Cops6O88545 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.73■□□□□ 0.75
Cops6O88545 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cops6O88545 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.73■□□□□ 0.75
Cops6O88545 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.73■□□□□ 0.75
Cops6O88545 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops6O88545 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.73■□□□□ 0.75
Cops6O88545 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Cops6O88545 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops6O88545 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops6O88545 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops6O88545 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops6O88545 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.72■□□□□ 0.75
Cops6O88545 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.72■□□□□ 0.75
Cops6O88545 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.72■□□□□ 0.75
Cops6O88545 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cops6O88545 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.72■□□□□ 0.75
Cops6O88545 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cops6O88545 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.72■□□□□ 0.75
Cops6O88545 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops6O88545 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.71■□□□□ 0.75
Cops6O88545 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.71■□□□□ 0.75
Cops6O88545 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.71■□□□□ 0.75
Cops6O88545 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.71■□□□□ 0.75
Cops6O88545 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.71■□□□□ 0.75
Cops6O88545 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.71■□□□□ 0.75
Cops6O88545 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cops6O88545 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cops6O88545 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cops6O88545 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms