Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cops4O88544 Gm15378-201ENSMUST00000121894 207 ntBASIC15.01□□□□□ -0.01
Cops4O88544 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cops4O88544 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.01□□□□□ -0.01
Cops4O88544 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Cops4O88544 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.01□□□□□ -0.01
Cops4O88544 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Asic1-205ENSMUST00000228185 1818 ntBASIC15.01□□□□□ -0.01
Cops4O88544 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops4O88544 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cops4O88544 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Ptprs-211ENSMUST00000223859 5588 ntBASIC15□□□□□ -0.01
Cops4O88544 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cops4O88544 Gm5643-201ENSMUST00000117081 966 ntBASIC15□□□□□ -0.01
Cops4O88544 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15□□□□□ -0.01
Cops4O88544 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15□□□□□ -0.01
Cops4O88544 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cops4O88544 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15□□□□□ -0.01
Cops4O88544 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cops4O88544 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cops4O88544 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cops4O88544 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Cops4O88544 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cops4O88544 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.99□□□□□ -0.01
Cops4O88544 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cops4O88544 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.98□□□□□ -0.01
Cops4O88544 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.98□□□□□ -0.01
Cops4O88544 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Gm24841-201ENSMUST00000158676 357 ntBASIC14.98□□□□□ -0.01
Cops4O88544 Gm17661-201ENSMUST00000170317 270 ntBASIC14.98□□□□□ -0.01
Cops4O88544 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.98□□□□□ -0.01
Cops4O88544 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Cops4O88544 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cops4O88544 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cops4O88544 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.97□□□□□ -0.01
Cops4O88544 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cops4O88544 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cops4O88544 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.97□□□□□ -0.01
Cops4O88544 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.97□□□□□ -0.01
Cops4O88544 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms