Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Dnmt3aO88508 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Dnmt3aO88508 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.29■□□□□ 0.2
Dnmt3aO88508 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Dnmt3aO88508 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Dnmt3aO88508 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Gm14859-201ENSMUST00000117752 357 ntBASIC16.27■□□□□ 0.2
Dnmt3aO88508 Gm7284-201ENSMUST00000131667 944 ntBASIC16.27■□□□□ 0.2
Dnmt3aO88508 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Gm27704-201ENSMUST00000185094 107 ntBASIC16.27■□□□□ 0.2
Dnmt3aO88508 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.27■□□□□ 0.2
Dnmt3aO88508 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.27■□□□□ 0.2
Dnmt3aO88508 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Dnmt3aO88508 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Dnmt3aO88508 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Dnmt3aO88508 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Dnmt3aO88508 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Dnmt3aO88508 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
Dnmt3aO88508 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.27■□□□□ 0.19
Dnmt3aO88508 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Dnmt3aO88508 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Dnmt3aO88508 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dnmt3aO88508 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Dnmt3aO88508 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.26■□□□□ 0.19
Dnmt3aO88508 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.26■□□□□ 0.19
Dnmt3aO88508 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.26■□□□□ 0.19
Dnmt3aO88508 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Dnmt3aO88508 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Dnmt3aO88508 Gm7367-201ENSMUST00000057611 492 ntBASIC16.26■□□□□ 0.19
Dnmt3aO88508 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Dnmt3aO88508 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Dnmt3aO88508 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms