Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm44430-201ENSMUST00000203376 995 ntBASIC15.82■□□□□ 0.12
Npc1O35604 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Npc1O35604 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Npc1O35604 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.82■□□□□ 0.12
Npc1O35604 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Npc1O35604 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.81■□□□□ 0.12
Npc1O35604 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Npc1O35604 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.81■□□□□ 0.12
Npc1O35604 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Npc1O35604 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Npc1O35604 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Npc1O35604 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Npc1O35604 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Npc1O35604 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.8■□□□□ 0.12
Npc1O35604 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.8■□□□□ 0.12
Npc1O35604 Olfr129-201ENSMUST00000122318 993 ntBASIC15.8■□□□□ 0.12
Npc1O35604 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.8■□□□□ 0.12
Npc1O35604 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.8■□□□□ 0.12
Npc1O35604 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Npc1O35604 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.8■□□□□ 0.12
Npc1O35604 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.8■□□□□ 0.12
Npc1O35604 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.8■□□□□ 0.12
Npc1O35604 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.8■□□□□ 0.12
Npc1O35604 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Npc1O35604 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Npc1O35604 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Npc1O35604 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Npc1O35604 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Npc1O35604 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.79■□□□□ 0.12
Npc1O35604 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.79■□□□□ 0.12
Npc1O35604 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Npc1O35604 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.79■□□□□ 0.12
Npc1O35604 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.79■□□□□ 0.12
Npc1O35604 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Npc1O35604 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.79■□□□□ 0.12
Npc1O35604 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Npc1O35604 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
Npc1O35604 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms