Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 Gm4535-201ENSMUST00000182274 558 ntBASIC17.57■□□□□ 0.4
Clk2O35491 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.57■□□□□ 0.4
Clk2O35491 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.57■□□□□ 0.4
Clk2O35491 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 Gm10355-201ENSMUST00000097146 517 ntBASIC17.57■□□□□ 0.4
Clk2O35491 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.57■□□□□ 0.4
Clk2O35491 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clk2O35491 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clk2O35491 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clk2O35491 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Clk2O35491 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.56■□□□□ 0.4
Clk2O35491 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.56■□□□□ 0.4
Clk2O35491 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clk2O35491 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Clk2O35491 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clk2O35491 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Clk2O35491 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clk2O35491 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Gm13418-201ENSMUST00000119097 944 ntBASIC17.56■□□□□ 0.4
Clk2O35491 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clk2O35491 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Clk2O35491 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.56■□□□□ 0.4
Clk2O35491 Gm8655-201ENSMUST00000221159 852 ntBASIC17.56■□□□□ 0.4
Clk2O35491 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Clk2O35491 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clk2O35491 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clk2O35491 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.55■□□□□ 0.4
Clk2O35491 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Gm25990-201ENSMUST00000102440 86 ntBASIC17.55■□□□□ 0.4
Clk2O35491 Gm8097-201ENSMUST00000117903 829 ntBASIC17.55■□□□□ 0.4
Clk2O35491 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.55■□□□□ 0.4
Clk2O35491 Gm18733-201ENSMUST00000173950 856 ntBASIC17.55■□□□□ 0.4
Clk2O35491 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.55■□□□□ 0.4
Clk2O35491 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.55■□□□□ 0.4
Clk2O35491 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.55■□□□□ 0.4
Clk2O35491 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.55■□□□□ 0.4
Clk2O35491 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clk2O35491 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Clk2O35491 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clk2O35491 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.54■□□□□ 0.4
Clk2O35491 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Clk2O35491 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.54■□□□□ 0.4
Clk2O35491 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.54■□□□□ 0.4
Clk2O35491 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Gm10060-201ENSMUST00000212002 111 ntBASIC17.54■□□□□ 0.4
Clk2O35491 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clk2O35491 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Clk2O35491 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk2O35491 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk2O35491 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clk2O35491 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clk2O35491 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms