Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.57■□□□□ 0.08
Polr2jO08740 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
Polr2jO08740 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Polr2jO08740 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.57■□□□□ 0.08
Polr2jO08740 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.57■□□□□ 0.08
Polr2jO08740 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.57■□□□□ 0.08
Polr2jO08740 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Polr2jO08740 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Polr2jO08740 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Polr2jO08740 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Polr2jO08740 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Polr2jO08740 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.56■□□□□ 0.08
Polr2jO08740 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Polr2jO08740 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.56■□□□□ 0.08
Polr2jO08740 Gm11539-201ENSMUST00000119837 557 ntBASIC15.56■□□□□ 0.08
Polr2jO08740 Gm44450-201ENSMUST00000199528 114 ntBASIC15.56■□□□□ 0.08
Polr2jO08740 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.56■□□□□ 0.08
Polr2jO08740 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.56■□□□□ 0.08
Polr2jO08740 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.56■□□□□ 0.08
Polr2jO08740 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.56■□□□□ 0.08
Polr2jO08740 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.56■□□□□ 0.08
Polr2jO08740 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Polr2jO08740 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Polr2jO08740 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.56■□□□□ 0.08
Polr2jO08740 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Polr2jO08740 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.55■□□□□ 0.08
Polr2jO08740 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.55■□□□□ 0.08
Polr2jO08740 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.55■□□□□ 0.08
Polr2jO08740 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Polr2jO08740 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.55■□□□□ 0.08
Polr2jO08740 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.55■□□□□ 0.08
Polr2jO08740 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Polr2jO08740 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Polr2jO08740 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Polr2jO08740 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Polr2jO08740 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Polr2jO08740 Gm21814-202ENSMUST00000203277 873 ntBASIC15.54■□□□□ 0.08
Polr2jO08740 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Polr2jO08740 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Polr2jO08740 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Polr2jO08740 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.54■□□□□ 0.08
Polr2jO08740 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.54■□□□□ 0.08
Polr2jO08740 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.54■□□□□ 0.08
Polr2jO08740 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Polr2jO08740 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
Polr2jO08740 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Polr2jO08740 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Polr2jO08740 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Polr2jO08740 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Polr2jO08740 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms