Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Usp35M0QWN7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.37■□□□□ 0.37
Usp35M0QWN7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp35M0QWN7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.36■□□□□ 0.37
Usp35M0QWN7 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.36■□□□□ 0.37
Usp35M0QWN7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Birc2-201ENSMUST00000054878 378 ntBASIC17.36■□□□□ 0.37
Usp35M0QWN7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.36■□□□□ 0.37
Usp35M0QWN7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp35M0QWN7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp35M0QWN7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp35M0QWN7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp35M0QWN7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp35M0QWN7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.33■□□□□ 0.37
Usp35M0QWN7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp35M0QWN7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp35M0QWN7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp35M0QWN7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp35M0QWN7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp35M0QWN7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms