Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
B020004C17RikJ3QP07 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Gm7787-201ENSMUST00000216858 688 ntBASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
B020004C17RikJ3QP07 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Gm18489-201ENSMUST00000172565 551 ntBASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Gm8396-201ENSMUST00000057361 823 ntBASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
B020004C17RikJ3QP07 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
B020004C17RikJ3QP07 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
B020004C17RikJ3QP07 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
B020004C17RikJ3QP07 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
B020004C17RikJ3QP07 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
B020004C17RikJ3QP07 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
B020004C17RikJ3QP07 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
B020004C17RikJ3QP07 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.02■□□□□ 0.47
B020004C17RikJ3QP07 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Gm14701-201ENSMUST00000117156 348 ntBASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Gm9682-201ENSMUST00000197505 556 ntBASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
B020004C17RikJ3QP07 Gm11841-201ENSMUST00000117060 1963 ntBASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms