Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm3139J3QK78 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm3139J3QK78 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.12■□□□□ 0.17
Gm3139J3QK78 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm3139J3QK78 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.12■□□□□ 0.17
Gm3139J3QK78 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.12■□□□□ 0.17
Gm3139J3QK78 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3139J3QK78 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Gm25745-201ENSMUST00000174945 133 ntBASIC16.11■□□□□ 0.17
Gm3139J3QK78 Mir6404-201ENSMUST00000183699 94 ntBASIC16.11■□□□□ 0.17
Gm3139J3QK78 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3139J3QK78 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.11■□□□□ 0.17
Gm3139J3QK78 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm3139J3QK78 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm3139J3QK78 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3139J3QK78 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm3139J3QK78 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms