Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Gm11594-201ENSMUST00000122313 162 ntBASIC19.42■□□□□ 0.7
Ube4aE9Q735 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube4aE9Q735 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ube4aE9Q735 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.41■□□□□ 0.7
Ube4aE9Q735 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.41■□□□□ 0.7
Ube4aE9Q735 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ube4aE9Q735 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ube4aE9Q735 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.4■□□□□ 0.7
Ube4aE9Q735 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Gm11764-201ENSMUST00000120221 623 ntBASIC19.4■□□□□ 0.7
Ube4aE9Q735 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Gm9727-201ENSMUST00000161387 555 ntBASIC19.4■□□□□ 0.7
Ube4aE9Q735 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4aE9Q735 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube4aE9Q735 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Ube4aE9Q735 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube4aE9Q735 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube4aE9Q735 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube4aE9Q735 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube4aE9Q735 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.39■□□□□ 0.69
Ube4aE9Q735 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4aE9Q735 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Gm12260-201ENSMUST00000122447 411 ntBASIC19.38■□□□□ 0.69
Ube4aE9Q735 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4aE9Q735 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Ube4aE9Q735 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.38■□□□□ 0.69
Ube4aE9Q735 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms