Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Hfm1D3Z4R1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Hfm1D3Z4R1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Hfm1D3Z4R1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Hfm1D3Z4R1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Hfm1D3Z4R1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Mir6990-201ENSMUST00000183724 91 ntBASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Hfm1D3Z4R1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Gm25948-201ENSMUST00000175334 112 ntBASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Hfm1D3Z4R1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Gm6226-201ENSMUST00000117765 1146 ntBASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Gm43474-201ENSMUST00000196415 774 ntBASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Hfm1D3Z4R1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC22.61■■□□□ 1.21
Hfm1D3Z4R1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hfm1D3Z4R1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hfm1D3Z4R1 Gm37811-201ENSMUST00000192416 2601 ntBASIC22.6■■□□□ 1.21
Hfm1D3Z4R1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hfm1D3Z4R1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC22.6■■□□□ 1.21
Hfm1D3Z4R1 AC158538.2-201ENSMUST00000225455 906 ntBASIC22.6■■□□□ 1.21
Hfm1D3Z4R1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hfm1D3Z4R1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hfm1D3Z4R1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Hfm1D3Z4R1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Gm20553-201ENSMUST00000204205 844 ntBASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Thap2-203ENSMUST00000218989 527 ntBASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hfm1D3Z4R1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Hfm1D3Z4R1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Hfm1D3Z4R1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Hfm1D3Z4R1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
Hfm1D3Z4R1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Hfm1D3Z4R1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms