Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm44346-201ENSMUST00000198851 141 ntBASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.59■□□□□ 0.25
Col4a6B1AVK5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col4a6B1AVK5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Gm11745-201ENSMUST00000121669 448 ntBASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Gm17271-201ENSMUST00000165535 355 ntBASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a6B1AVK5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Gm5312-201ENSMUST00000203728 547 ntBASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a6B1AVK5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Gm7787-201ENSMUST00000216858 688 ntBASIC16.56■□□□□ 0.24
Col4a6B1AVK5 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Gm43125-201ENSMUST00000201724 730 ntBASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.56■□□□□ 0.24
Col4a6B1AVK5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a6B1AVK5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Gm27321-201ENSMUST00000185021 205 ntBASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a6B1AVK5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a6B1AVK5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms