Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.62□□□□□ -0.23
Col6a4A2AX52 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Gm44872-201ENSMUST00000207864 420 ntBASIC13.62□□□□□ -0.23
Col6a4A2AX52 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.62□□□□□ -0.23
Col6a4A2AX52 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Gm9172-201ENSMUST00000212092 954 ntBASIC13.62□□□□□ -0.23
Col6a4A2AX52 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.62□□□□□ -0.23
Col6a4A2AX52 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Col6a4A2AX52 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.61□□□□□ -0.23
Col6a4A2AX52 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.61□□□□□ -0.23
Col6a4A2AX52 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.61□□□□□ -0.23
Col6a4A2AX52 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Col6a4A2AX52 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col6a4A2AX52 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.6□□□□□ -0.23
Col6a4A2AX52 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.6□□□□□ -0.23
Col6a4A2AX52 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Gm27321-201ENSMUST00000185021 205 ntBASIC13.6□□□□□ -0.23
Col6a4A2AX52 Gm43438-201ENSMUST00000198133 379 ntBASIC13.6□□□□□ -0.23
Col6a4A2AX52 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.6□□□□□ -0.23
Col6a4A2AX52 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a4A2AX52 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.59□□□□□ -0.23
Col6a4A2AX52 Gm8655-201ENSMUST00000221159 852 ntBASIC13.59□□□□□ -0.23
Col6a4A2AX52 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms