Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav12d-1A0N8R0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav12d-1A0N8R0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Gm44450-201ENSMUST00000199528 114 ntBASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav12d-1A0N8R0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms