Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.3□□□□□ -0.28
Trav18A0A075B656 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.3□□□□□ -0.28
Trav18A0A075B656 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav18A0A075B656 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.29□□□□□ -0.28
Trav18A0A075B656 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Gm30025-201ENSMUST00000218555 728 ntBASIC13.29□□□□□ -0.28
Trav18A0A075B656 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav18A0A075B656 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.28□□□□□ -0.28
Trav18A0A075B656 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Gm18421-201ENSMUST00000204122 625 ntBASIC13.28□□□□□ -0.28
Trav18A0A075B656 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Gm10566-201ENSMUST00000086739 996 ntBASIC13.28□□□□□ -0.28
Trav18A0A075B656 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.28□□□□□ -0.28
Trav18A0A075B656 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms