Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav1A0A075B5Z4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav1A0A075B5Z4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav1A0A075B5Z4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav1A0A075B5Z4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav1A0A075B5Z4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav1A0A075B5Z4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav1A0A075B5Z4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav1A0A075B5Z4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav1A0A075B5Z4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Trav1A0A075B5Z4 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Mir6982-201ENSMUST00000184354 68 ntBASIC15.05■□□□□ -0
Trav1A0A075B5Z4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Gm44430-201ENSMUST00000203376 995 ntBASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav1A0A075B5Z4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.04■□□□□ -0
Trav1A0A075B5Z4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav1A0A075B5Z4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms