Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv4A0A075B5I2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Gm5587-201ENSMUST00000206270 674 ntBASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv4A0A075B5I2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv4A0A075B5I2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv4A0A075B5I2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv4A0A075B5I2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv4A0A075B5I2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv4A0A075B5I2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv4A0A075B5I2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv4A0A075B5I2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv4A0A075B5I2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv4A0A075B5I2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Gm6623-201ENSMUST00000173570 544 ntBASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trbv4A0A075B5I2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms