Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC007823.1-201ENST00000569932 1566 ntBASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NECTIN3Q9NQS3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 AP002088.1-201ENST00000382740 395 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 SNORA75B-201ENST00000384053 137 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 RNU1-101P-201ENST00000391171 127 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 SNORA40C-201ENST00000391285 128 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 AL356776.1-201ENST00000406574 447 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 RPL5P18-201ENST00000406671 891 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 SKA2P1-201ENST00000425592 390 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 SRIP2-201ENST00000428470 166 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 MYL8P-204ENST00000431574 518 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 BX679664.1-201ENST00000434429 253 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 RPL21P13-201ENST00000488305 481 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 PHBP14-201ENST00000512887 367 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 RN7SKP18-201ENST00000516005 275 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 AC026403.1-201ENST00000518938 295 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 VN1R80P-201ENST00000597126 338 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 AC093913.1-201ENST00000614178 329 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 AC099654.14-201ENST00000638599 341 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 SRP72P2-201ENST00000344851 1979 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 AC073073.2-201ENST00000609827 2578 ntBASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
NECTIN3Q9NQS3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
NECTIN3Q9NQS3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NECTIN3Q9NQS3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.4□□□□□ -1.86
NECTIN3Q9NQS3 SNORD9-201ENST00000362566 104 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 RNU6-778P-201ENST00000363269 103 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 Y_RNA.160-201ENST00000363677 92 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 RNU6-82P-201ENST00000363970 107 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 RNU6-805P-201ENST00000365643 106 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 SNORA32.2-201ENST00000384049 122 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 MIR200C-201ENST00000384980 68 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AL162578.1-201ENST00000406202 378 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC091286.1-201ENST00000431233 461 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 MTCO3P18-201ENST00000440206 761 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 MTATP6P7-201ENST00000453315 681 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC007547.1-201ENST00000462177 490 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 RPL21P93-201ENST00000480465 489 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC083904.1-201ENST00000487828 231 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 RPL21P129-201ENST00000491732 478 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 MIR892C-201ENST00000516410 77 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 SNORA70.18-201ENST00000516696 98 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC093331.1-201ENST00000521474 169 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 OR11H5P-201ENST00000554039 926 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 MIR4429-201ENST00000580105 73 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 HMGN2P15-201ENST00000585707 270 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC006504.8-201ENST00000621046 635 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AL031601.2-202ENST00000622650 282 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 U2.21-201ENST00000637295 81 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AC009093.8-201ENST00000641769 292 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.87
NECTIN3Q9NQS3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.39□□□□□ -1.87
NECTIN3Q9NQS3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms