Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 RNU4-31P-201ENST00000384211 141 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 MIR518D-201ENST00000385014 87 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 RNU6-882P-201ENST00000391025 103 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 RSU1P2-202ENST00000437884 485 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC245517.4-201ENST00000448601 281 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 RPS27AP10-201ENST00000496103 208 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC138853.1-201ENST00000503549 823 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC111193.1-201ENST00000504097 155 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC021739.1-201ENST00000559631 174 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC079791.1-201ENST00000605356 973 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 BX322635.1-201ENST00000605804 496 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AL137246.1-201ENST00000607072 977 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AL355472.4-201ENST00000610233 626 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC012676.2-201ENST00000619258 186 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AC090772.4-201ENST00000623599 362 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 AL118508.4-201ENST00000624142 1176 ntBASIC0.45□□□□□ -2.34
CPSF4LA6NMK7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 RNA5SP432-201ENST00000362480 116 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 RNU6-1222P-201ENST00000384615 107 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 RNU2-36P-201ENST00000410361 191 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AC096649.2-201ENST00000416186 393 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 RPL7P29-201ENST00000437151 728 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AL135790.2-201ENST00000437701 267 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AL049734.2-201ENST00000441066 616 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AC104073.1-201ENST00000451988 151 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 SNRPFP3-201ENST00000457792 225 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 Y_RNA.638-201ENST00000459374 113 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 RNU5A-7P-201ENST00000515979 116 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 RNA5SP404-201ENST00000517118 132 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AP006587.4-201ENST00000526053 529 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AP003122.4-201ENST00000530980 758 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AC136932.1-201ENST00000574771 208 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AC138473.1-201ENST00000605717 526 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AL020996.3-201ENST00000606617 222 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AC007349.4-201ENST00000608114 532 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AC009974.1-201ENST00000608881 455 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AL365204.3-201ENST00000612448 685 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 AC099842.1-201ENST00000619919 596 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.44□□□□□ -2.34
CPSF4LA6NMK7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 ZNF680P1-201ENST00000436625 1469 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 MIR1290-201ENST00000408735 78 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 RNU2-63P-201ENST00000410792 194 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 RPS24P7-201ENST00000416921 246 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AC009518.2-201ENST00000418056 731 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 RAC1P7-201ENST00000445367 377 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 RPL30P7-201ENST00000479312 323 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AC134050.1-201ENST00000495088 933 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 ACA64.5-201ENST00000516207 127 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 CENPUP1-201ENST00000526649 1202 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AC005832.3-201ENST00000537929 631 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AC012414.6-201ENST00000568241 401 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AC010900.2-201ENST00000604508 210 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AC006213.4-201ENST00000616184 634 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AL391597.1-201ENST00000618707 694 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 MIR6130-201ENST00000619419 109 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AL121890.5-201ENST00000620848 304 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 AC090517.3-201ENST00000625170 141 ntBASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.43□□□□□ -2.34
CPSF4LA6NMK7 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 RNA5SP327-201ENST00000362494 101 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 RNU6-26P-201ENST00000383985 107 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 RNU6-439P-201ENST00000384188 106 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC083875.1-201ENST00000419509 405 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 NDUFB4P7-201ENST00000423198 363 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 UBE2V1P4-201ENST00000425374 344 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AL035410.1-201ENST00000427409 427 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC024082.2-201ENST00000434771 238 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC017099.1-201ENST00000448261 1028 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 RPS20P24-201ENST00000457473 361 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC104629.2-201ENST00000468627 598 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 LARP1BP2-201ENST00000486594 519 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 AC079140.2-201ENST00000506193 142 ntBASIC0.42□□□□□ -2.34
CPSF4LA6NMK7 FABP5P5-201ENST00000515537 406 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms