Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC022447.1-201ENST00000515358 464 ntBASIC2.69□□□□□ -1.98
UBQLN3Q9H347 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UBQLN3Q9H347 AC106782.4-201ENST00000568264 210 ntBASIC2.69□□□□□ -1.98
UBQLN3Q9H347 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UBQLN3Q9H347 AC078899.3-201ENST00000599065 212 ntBASIC2.69□□□□□ -1.98
UBQLN3Q9H347 Z84480.1-201ENST00000605131 311 ntBASIC2.69□□□□□ -1.98
UBQLN3Q9H347 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.69□□□□□ -1.98
UBQLN3Q9H347 AC013562.2-201ENST00000611632 603 ntBASIC2.69□□□□□ -1.98
UBQLN3Q9H347 AC011939.3-201ENST00000613686 466 ntBASIC2.69□□□□□ -1.98
UBQLN3Q9H347 U6.99-201ENST00000637524 83 ntBASIC2.69□□□□□ -1.98
UBQLN3Q9H347 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.69□□□□□ -1.98
UBQLN3Q9H347 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 Y_RNA.359-201ENST00000365498 102 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 SNORA4.3-201ENST00000365564 137 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 SNORA75-201ENST00000384158 137 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 SNORA24.1-201ENST00000384401 135 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 NDUFS5P4-201ENST00000412983 318 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 RPL26P27-201ENST00000414397 437 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 EEF1A1P41-201ENST00000414667 207 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 BPY2DP-201ENST00000422208 265 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 MTCYBP1-201ENST00000454315 1119 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 RPL23AP70-201ENST00000483361 460 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC117522.2-201ENST00000510049 657 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 MTCO3P28-201ENST00000513351 515 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC090572.1-201ENST00000519251 160 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC107016.2-201ENST00000547968 190 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 ADI1P3-201ENST00000549509 470 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 MTCO3P13-201ENST00000577757 781 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 NBR2-204ENST00000587322 63 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AL355598.1-201ENST00000604169 202 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AL033523.1-201ENST00000605153 153 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 MIR15A-201ENST00000607334 83 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AL020991.1-201ENST00000612314 373 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 U2.21-201ENST00000637295 81 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC096644.4-201ENST00000563417 2912 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 AC092447.7-201ENST00000422212 1621 ntBASIC2.68□□□□□ -1.98
UBQLN3Q9H347 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UBQLN3Q9H347 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 SNORA80A-201ENST00000363922 136 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 Y_RNA.534-201ENST00000384599 112 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AL122016.1-201ENST00000403365 367 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AC023141.4-201ENST00000412031 328 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AC080125.1-201ENST00000414888 684 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 MTND3P17-201ENST00000416968 344 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AL109913.1-201ENST00000421173 514 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AL358934.1-201ENST00000432346 324 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 GPR143P-201ENST00000434155 205 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 MTATP6P16-201ENST00000434543 526 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 RPS20P5-201ENST00000434808 360 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AL513043.1-201ENST00000439124 535 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AC116562.3-201ENST00000506136 177 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AC109927.2-201ENST00000506416 303 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 RNU6-123P-201ENST00000516163 102 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 RNU6-410P-201ENST00000517006 107 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 RNU6-430P-201ENST00000517078 107 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AC068587.5-201ENST00000528506 175 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 GLYCAM1-201ENST00000546596 285 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 NACAP3-201ENST00000552100 481 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 LARP7P3-201ENST00000579888 337 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 MIR3611-201ENST00000584484 83 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AL627309.6-201ENST00000606857 840 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AC109347.2-201ENST00000610220 349 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AC107871.2-201ENST00000612894 502 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 AL359547.2-201ENST00000615810 418 ntBASIC2.67□□□□□ -1.98
UBQLN3Q9H347 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UBQLN3Q9H347 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms