Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL139397.2-201ENST00000404529 772 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AL356776.1-201ENST00000406574 447 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 FAT1P1-201ENST00000406588 507 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 RNU2-33P-201ENST00000410344 192 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 RNA5SP229-201ENST00000410809 99 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AC022028.1-201ENST00000412054 408 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AL160275.3-201ENST00000423876 471 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 SCARNA18-201ENST00000459004 134 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 RN7SL863P-201ENST00000462370 296 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 RPL30P5-201ENST00000494923 336 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 RNA5SP341-201ENST00000516261 117 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AC107934.2-201ENST00000518653 310 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 BNIP3P6-201ENST00000549284 499 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 TRAV28-201ENST00000557548 323 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 ZNF192P1-203ENST00000565888 810 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AL161798.1-201ENST00000604630 131 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 uc_338.1-201ENST00000612113 180 ntBASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
PAAF1Q9BRP4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 Y_RNA.86-201ENST00000363020 111 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 Y_RNA.157-201ENST00000363638 102 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 Y_RNA.231-201ENST00000364358 102 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AL591034.1-201ENST00000407447 340 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 Y_RNA.604-201ENST00000410574 102 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC009161.1-201ENST00000417306 376 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 RPL23AP82-202ENST00000427528 469 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 RPL23AP69-201ENST00000431134 458 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 ERLEC1P1-201ENST00000433806 578 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AL512844.2-201ENST00000433990 593 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 RPL7P28-201ENST00000437739 740 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 RNU7-180P-201ENST00000459240 63 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC004801.2-202ENST00000463559 283 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 RPL23AP67-201ENST00000465341 474 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 RPL23AP11-201ENST00000475260 469 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AP001086.1-201ENST00000494882 321 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 MTCYBP18-201ENST00000501056 747 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC091885.1-201ENST00000506658 268 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC098799.2-201ENST00000509466 868 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AL138976.2-201ENST00000563989 694 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC093913.1-201ENST00000614178 329 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC018692.3-201ENST00000623929 123 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 AC090740.1-201ENST00000623193 2262 ntBASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PAAF1Q9BRP4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
PAAF1Q9BRP4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.46□□□□□ -1.85
PAAF1Q9BRP4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AL122016.1-201ENST00000403365 367 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 MIR1183-201ENST00000408856 89 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 RNU4-26P-201ENST00000410270 107 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AC138393.2-201ENST00000414742 246 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 ARL5AP1-201ENST00000418991 388 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AL513185.2-201ENST00000425543 193 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AL591704.1-201ENST00000432574 275 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 RPL36AP53-201ENST00000432891 316 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 Z82210.1-201ENST00000440037 231 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 RNA5SP310-201ENST00000459084 116 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 S100A11P2-201ENST00000467589 312 ntBASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.46□□□□□ -1.86
PAAF1Q9BRP4 RNU6-1038P-201ENST00000516516 104 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms