Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-699P-201ENST00000517081 110 ntBASIC3.75□□□□□ -1.81
CD40P25942 AC011602.1-201ENST00000546484 331 ntBASIC3.75□□□□□ -1.81
CD40P25942 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.75□□□□□ -1.81
CD40P25942 TVP23BP1-201ENST00000557500 617 ntBASIC3.75□□□□□ -1.81
CD40P25942 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CD40P25942 AMZ2P1-203ENST00000565833 850 ntBASIC3.75□□□□□ -1.81
CD40P25942 CPDP1-201ENST00000579660 283 ntBASIC3.75□□□□□ -1.81
CD40P25942 RN7SL176P-201ENST00000580352 264 ntBASIC3.75□□□□□ -1.81
CD40P25942 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CD40P25942 RPL7P50-201ENST00000600588 727 ntBASIC3.75□□□□□ -1.81
CD40P25942 Z98200.1-201ENST00000607298 470 ntBASIC3.75□□□□□ -1.81
CD40P25942 AC004852.3-201ENST00000614131 326 ntBASIC3.75□□□□□ -1.81
CD40P25942 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CD40P25942 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.75□□□□□ -1.81
CD40P25942 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CD40P25942 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CD40P25942 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CD40P25942 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
CD40P25942 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CD40P25942 AL133383.2-201ENST00000622958 2336 ntBASIC3.75□□□□□ -1.81
CD40P25942 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CD40P25942 MTND4P1-201ENST00000457501 1466 ntBASIC3.74□□□□□ -1.81
CD40P25942 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CD40P25942 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CD40P25942 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CD40P25942 RNU6-490P-201ENST00000362985 107 ntBASIC3.74□□□□□ -1.81
CD40P25942 RNU6-270P-201ENST00000364131 105 ntBASIC3.74□□□□□ -1.81
CD40P25942 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CD40P25942 RNU1-44P-201ENST00000384453 163 ntBASIC3.74□□□□□ -1.81
CD40P25942 MIR888-201ENST00000401186 77 ntBASIC3.74□□□□□ -1.81
CD40P25942 RNU6-174P-201ENST00000410406 106 ntBASIC3.74□□□□□ -1.81
CD40P25942 RNU6-55P-201ENST00000411092 107 ntBASIC3.74□□□□□ -1.81
CD40P25942 RN7SKP53-201ENST00000411337 315 ntBASIC3.74□□□□□ -1.81
CD40P25942 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.74□□□□□ -1.81
CD40P25942 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CD40P25942 AC007389.2-201ENST00000434630 306 ntBASIC3.74□□□□□ -1.81
CD40P25942 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.74□□□□□ -1.81
CD40P25942 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.74□□□□□ -1.81
CD40P25942 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.74□□□□□ -1.81
CD40P25942 BTF3P15-201ENST00000455606 336 ntBASIC3.74□□□□□ -1.81
CD40P25942 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.74□□□□□ -1.81
CD40P25942 FO393415.2-201ENST00000480085 343 ntBASIC3.74□□□□□ -1.81
CD40P25942 RN7SL691P-201ENST00000494487 301 ntBASIC3.74□□□□□ -1.81
CD40P25942 AL592156.1-201ENST00000508758 304 ntBASIC3.74□□□□□ -1.81
CD40P25942 RNU6-377P-201ENST00000515965 102 ntBASIC3.74□□□□□ -1.81
CD40P25942 RNA5SP49-201ENST00000516450 115 ntBASIC3.74□□□□□ -1.81
CD40P25942 RNU6-264P-201ENST00000517134 104 ntBASIC3.74□□□□□ -1.81
CD40P25942 LINC00933-203ENST00000559812 219 ntBASIC3.74□□□□□ -1.81
CD40P25942 MIR4273-201ENST00000582824 84 ntBASIC3.74□□□□□ -1.81
CD40P25942 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.74□□□□□ -1.81
CD40P25942 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.74□□□□□ -1.81
CD40P25942 AC010201.1-201ENST00000605051 540 ntBASIC3.74□□□□□ -1.81
CD40P25942 MTND4LP5-201ENST00000605152 292 ntBASIC3.74□□□□□ -1.81
CD40P25942 AC018889.1-201ENST00000605372 397 ntBASIC3.74□□□□□ -1.81
CD40P25942 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.74□□□□□ -1.81
CD40P25942 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
CD40P25942 AC083806.3-201ENST00000614016 455 ntBASIC3.74□□□□□ -1.81
CD40P25942 AC007485.1-201ENST00000616755 206 ntBASIC3.74□□□□□ -1.81
CD40P25942 FP236240.3-201ENST00000623061 327 ntBASIC3.74□□□□□ -1.81
CD40P25942 SCARNA4-202ENST00000625402 129 ntBASIC3.74□□□□□ -1.81
CD40P25942 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CD40P25942 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.74□□□□□ -1.81
CD40P25942 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CD40P25942 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CD40P25942 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CD40P25942 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.73□□□□□ -1.81
CD40P25942 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.73□□□□□ -1.81
CD40P25942 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CD40P25942 SRP72P2-201ENST00000344851 1979 ntBASIC3.73□□□□□ -1.81
CD40P25942 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CD40P25942 Y_RNA.48-201ENST00000362710 103 ntBASIC3.73□□□□□ -1.81
CD40P25942 RNU6-78P-201ENST00000362897 107 ntBASIC3.73□□□□□ -1.81
CD40P25942 MIR521-1-201ENST00000384902 87 ntBASIC3.73□□□□□ -1.81
CD40P25942 U3.37-201ENST00000408528 213 ntBASIC3.73□□□□□ -1.81
CD40P25942 MCFD2P1-201ENST00000417812 300 ntBASIC3.73□□□□□ -1.81
CD40P25942 AC099548.1-201ENST00000421443 426 ntBASIC3.73□□□□□ -1.81
CD40P25942 AL157831.1-201ENST00000426134 473 ntBASIC3.73□□□□□ -1.81
CD40P25942 AL160004.2-201ENST00000432935 350 ntBASIC3.73□□□□□ -1.81
CD40P25942 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.73□□□□□ -1.81
CD40P25942 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.73□□□□□ -1.81
CD40P25942 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.73□□□□□ -1.81
CD40P25942 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.73□□□□□ -1.81
CD40P25942 NUTF2P7-201ENST00000453086 375 ntBASIC3.73□□□□□ -1.81
CD40P25942 U8.21-201ENST00000459536 136 ntBASIC3.73□□□□□ -1.81
CD40P25942 AC133134.1-201ENST00000466800 359 ntBASIC3.73□□□□□ -1.81
CD40P25942 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.73□□□□□ -1.81
CD40P25942 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.73□□□□□ -1.81
CD40P25942 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.73□□□□□ -1.81
CD40P25942 AC025884.1-201ENST00000556034 378 ntBASIC3.73□□□□□ -1.81
CD40P25942 RPL23AP97-201ENST00000568955 471 ntBASIC3.73□□□□□ -1.81
CD40P25942 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.73□□□□□ -1.81
CD40P25942 AL139395.1-201ENST00000603662 160 ntBASIC3.73□□□□□ -1.81
CD40P25942 AC012468.1-201ENST00000604888 430 ntBASIC3.73□□□□□ -1.81
CD40P25942 AC008962.1-201ENST00000605729 304 ntBASIC3.73□□□□□ -1.81
CD40P25942 MIR8059-201ENST00000620427 81 ntBASIC3.73□□□□□ -1.81
CD40P25942 AC073308.1-201ENST00000623696 305 ntBASIC3.73□□□□□ -1.81
CD40P25942 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.73□□□□□ -1.81
CD40P25942 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CD40P25942 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CD40P25942 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms