Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC245297.2-201ENST00000610119 565 ntBASIC2.03□□□□□ -2.08
TREX1Q9NSU2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 RNU6-750P-201ENST00000390946 107 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AL136310.1-201ENST00000404926 654 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 RN7SKP32-201ENST00000410167 303 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 RNU2-2P-201ENST00000410396 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC096649.2-201ENST00000416186 393 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC027124.2-201ENST00000428249 105 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 MED14P1-201ENST00000430517 648 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 RPS25P9-201ENST00000435591 252 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 EEF1A1P39-201ENST00000440791 250 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC096638.1-201ENST00000444678 216 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AL358794.1-201ENST00000445689 381 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 TPT1P14-201ENST00000448018 505 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC116353.3-201ENST00000511215 249 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC008413.1-201ENST00000511864 177 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 RNU7-193P-201ENST00000516723 65 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 MIR5089-201ENST00000580047 84 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC078899.2-201ENST00000595282 212 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AP000403.1-201ENST00000603349 851 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC004805.2-201ENST00000605382 482 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC239868.4-201ENST00000608318 671 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AL133445.2-201ENST00000611191 527 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.15-201ENST00000611544 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.16-201ENST00000613119 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.12-201ENST00000613778 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.20-201ENST00000613956 192 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.9-201ENST00000615427 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.11-201ENST00000616345 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.2-201ENST00000616535 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.3-201ENST00000617785 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.19-201ENST00000618602 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 RNU2-1-201ENST00000618664 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.6-201ENST00000619225 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.5-201ENST00000619465 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 U2.10-201ENST00000620268 191 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC004808.1-201ENST00000627671 721 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 MIR219B-201ENST00000637023 88 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.02□□□□□ -2.09
TREX1Q9NSU2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
TREX1Q9NSU2 AC080100.1-201ENST00000624239 5356 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC004520.1-201ENST00000608362 1413 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 Y_RNA.245-201ENST00000364493 95 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 Y_RNA.465-201ENST00000384293 102 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 RNA5SP425-201ENST00000410336 112 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 RNA5SP270-201ENST00000411361 118 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AL445646.1-201ENST00000431784 216 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 SNRPEP9-201ENST00000436794 238 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 MTCO3P45-201ENST00000443036 613 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 MTND5P13-201ENST00000513046 1079 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC010186.2-204ENST00000537668 439 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC009712.1-201ENST00000564938 316 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 MIR3945-201ENST00000581853 98 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC013412.1-201ENST00000610687 192 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 YWHAEP7-203ENST00000622054 312 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AC064859.1-201ENST00000624741 174 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.01□□□□□ -2.09
TREX1Q9NSU2 MIR7157-201ENST00000635801 60 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 AL359851.1-201ENST00000569460 4997 ntBASIC2.01□□□□□ -2.09
TREX1Q9NSU2 DDX43P2-201ENST00000604753 1354 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
TREX1Q9NSU2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TREX1Q9NSU2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2□□□□□ -2.09
TREX1Q9NSU2 Y_RNA.192-201ENST00000363977 102 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 RNU6-621P-201ENST00000364752 109 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 RNA5SP126-201ENST00000365092 109 ntBASIC2□□□□□ -2.09
TREX1Q9NSU2 ERHP2-201ENST00000402323 299 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms