Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC243972.3-201ENST00000539655 198 ntBASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 MIR548AB-201ENST00000584917 84 ntBASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 HMGN1P30-201ENST00000589286 268 ntBASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 AL358072.1-201ENST00000604156 575 ntBASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 AC112191.3-201ENST00000604371 277 ntBASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 AL137847.3-201ENST00000611521 109 ntBASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 AC034102.8-201ENST00000615146 484 ntBASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 AC010297.1-201ENST00000623948 149 ntBASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 U2.21-201ENST00000637295 81 ntBASIC2.13□□□□□ -2.07
HDHD3Q9BSH5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 SNORD56.5-201ENST00000364281 72 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 U8.8-201ENST00000365399 135 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 RNU6-198P-201ENST00000384258 104 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 FO393413.1-201ENST00000402892 195 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 RNU2-36P-201ENST00000410361 191 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 RPL17P12-201ENST00000413391 526 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC019097.1-201ENST00000424783 735 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AL589872.1-201ENST00000426602 288 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 ISCA1P1-201ENST00000426679 387 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 ELOCP14-201ENST00000428070 331 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 CETN4P-201ENST00000432407 469 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 MTND1P28-201ENST00000435623 950 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 RPS12P2-201ENST00000439728 269 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 ELOCP7-201ENST00000439968 331 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AL031667.1-201ENST00000440222 725 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 CYCSP32-201ENST00000440548 321 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 WASF1P1-201ENST00000447560 1131 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 S100A11P2-201ENST00000467589 312 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 DSTNP2-201ENST00000504533 515 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC114797.1-201ENST00000514003 728 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AP003467.2-201ENST00000520175 319 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC007834.2-201ENST00000536310 343 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 OSBPL9P5-201ENST00000542581 171 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AL391261.3-201ENST00000557194 520 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 MIR5195-201ENST00000583555 115 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC020895.1-201ENST00000595362 272 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC025811.1-201ENST00000604312 472 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AL161798.1-201ENST00000604630 131 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC007619.2-201ENST00000605743 379 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC093732.2-201ENST00000607950 274 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC239868.4-201ENST00000608318 671 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AC097520.1-201ENST00000624435 385 ntBASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.12□□□□□ -2.07
HDHD3Q9BSH5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 RNU1-51P-201ENST00000365345 176 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 RNU5E-6P-201ENST00000365574 115 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 SMIM11P1-201ENST00000369586 178 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 RNU6-140P-201ENST00000384566 108 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 MIR23B-201ENST00000384832 97 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 MT-TH-201ENST00000387441 69 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 SNORA26.8-201ENST00000391306 124 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AF228730.1-201ENST00000397972 663 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AL139095.1-201ENST00000404326 391 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 HMGN2P35-201ENST00000412164 270 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AC129850.1-201ENST00000436203 508 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 MTND1P30-201ENST00000441241 901 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 UBE2D3P4-201ENST00000441973 436 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 FABP5P15-201ENST00000453566 214 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AC027673.1-201ENST00000456245 405 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 RBM43P1-201ENST00000476891 1081 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AL160314.1-201ENST00000490836 438 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AC009901.1-201ENST00000506703 541 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AC108043.1-201ENST00000512696 574 ntBASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.11□□□□□ -2.07
HDHD3Q9BSH5 RN7SKP132-201ENST00000516001 208 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms