Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PTP4A1Q93096 HSPE1P11-201ENST00000339579 310 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 RNU6-190P-201ENST00000384154 102 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 SNORD88.1-201ENST00000408684 91 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 HMGN2P35-201ENST00000412164 270 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.72□□□□□ -1.97
PTP4A1Q93096 AL593851.1-201ENST00000426171 157 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 EEF1B2P7-201ENST00000451177 676 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.72□□□□□ -1.97
PTP4A1Q93096 AC233279.1-201ENST00000455300 423 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 MTCO2P29-201ENST00000465212 189 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 AC139453.3-201ENST00000493276 369 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 RPL22P13-201ENST00000493291 347 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 SCARNA3-201ENST00000517097 143 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 AC023824.2-201ENST00000566185 400 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 UBL5P2-201ENST00000583788 219 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 MIR4765-201ENST00000585007 77 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.72□□□□□ -1.97
PTP4A1Q93096 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PTP4A1Q93096 AL391813.2-201ENST00000609113 322 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 AL355816.2-201ENST00000610049 647 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 AC091953.2-201ENST00000623979 160 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 AC004777.1-201ENST00000624317 287 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 Z99571.1-201ENST00000636677 394 ntBASIC2.72□□□□□ -1.97
PTP4A1Q93096 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PTP4A1Q93096 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PTP4A1Q93096 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC073343.1-201ENST00000328239 651 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC073325.2-201ENST00000339545 159 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 SNORA38.1-201ENST00000364172 131 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 SNORD67-201ENST00000390833 111 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AL139095.1-201ENST00000404326 391 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 MIR1302-8-201ENST00000408342 128 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC080125.1-201ENST00000414888 684 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 SUMO1P4-201ENST00000429430 302 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AL591704.1-201ENST00000432574 275 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 RPS29P6-201ENST00000438196 145 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC003071.1-201ENST00000451219 789 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 AL139824.2-201ENST00000458731 1095 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 RN7SL863P-201ENST00000462370 296 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 MTND1P22-201ENST00000510572 951 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 RNU6-1183P-201ENST00000517054 60 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AP003122.3-201ENST00000526316 255 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC084851.1-201ENST00000529105 249 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 MIR3118-1-201ENST00000581787 76 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 MIR3199-1-201ENST00000582434 88 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC090616.2-202ENST00000584248 222 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC024153.1-201ENST00000603103 365 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC091152.3-201ENST00000604227 325 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC103710.2-201ENST00000609912 942 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 AC010678.1-201ENST00000614118 713 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 MIR7112-201ENST00000616126 65 ntBASIC2.71□□□□□ -1.98
PTP4A1Q93096 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.71□□□□□ -1.98
PTP4A1Q93096 AL161431.1-201ENST00000618966 4205 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 AL359854.1-201ENST00000614203 1594 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PTP4A1Q93096 SMIM11P1-201ENST00000369586 178 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PTP4A1Q93096 Y_RNA.608-201ENST00000410647 95 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 RNU2-8P-201ENST00000410727 190 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 COX6CP12-201ENST00000446748 202 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 RPL30P6-201ENST00000475925 342 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 RNA5SP112-201ENST00000515937 99 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTP4A1Q93096 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 LINC00933-203ENST00000559812 219 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC083760.1-201ENST00000589621 670 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC005261.5-201ENST00000596280 355 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 BNIP3P33-201ENST00000598912 569 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC073544.2-201ENST00000601155 540 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC105129.3-201ENST00000605455 485 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC022893.3-201ENST00000607665 437 ntBASIC2.7□□□□□ -1.98
PTP4A1Q93096 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTP4A1Q93096 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
PTP4A1Q93096 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms