Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC079089.3-201ENST00000603094 673 ntBASIC2.41□□□□□ -2.02
SKA3Q8IX90 AP001981.2-201ENST00000603241 418 ntBASIC2.41□□□□□ -2.02
SKA3Q8IX90 AC092354.1-201ENST00000606057 376 ntBASIC2.41□□□□□ -2.02
SKA3Q8IX90 AC104237.2-201ENST00000612456 443 ntBASIC2.41□□□□□ -2.02
SKA3Q8IX90 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.41□□□□□ -2.02
SKA3Q8IX90 AL603755.1-201ENST00000619504 163 ntBASIC2.41□□□□□ -2.02
SKA3Q8IX90 AC068057.2-201ENST00000624047 895 ntBASIC2.41□□□□□ -2.02
SKA3Q8IX90 AC006386.2-201ENST00000624491 75 ntBASIC2.41□□□□□ -2.02
SKA3Q8IX90 AC012005.1-201ENST00000624575 75 ntBASIC2.41□□□□□ -2.02
SKA3Q8IX90 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.41□□□□□ -2.02
SKA3Q8IX90 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SKA3Q8IX90 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SKA3Q8IX90 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.41□□□□□ -2.02
SKA3Q8IX90 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.4□□□□□ -2.02
SKA3Q8IX90 RNU6-198P-201ENST00000384258 104 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 RNU5A-2P-201ENST00000384337 116 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 RNU6-278P-201ENST00000390945 109 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 AL512633.1-201ENST00000399931 655 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SKA3Q8IX90 AL031577.2-201ENST00000404133 280 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.4□□□□□ -2.03
SKA3Q8IX90 USP9YP13-201ENST00000417797 480 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 COTL1P1-201ENST00000422309 375 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 FCF1P1-201ENST00000432690 571 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.4□□□□□ -2.03
SKA3Q8IX90 DDX3P2-201ENST00000446138 111 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 AL590365.1-201ENST00000450788 243 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.4□□□□□ -2.03
SKA3Q8IX90 MTCO2P6-201ENST00000463134 685 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.4□□□□□ -2.03
SKA3Q8IX90 AP000797.1-201ENST00000478870 387 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.4□□□□□ -2.03
SKA3Q8IX90 RPF2P2-201ENST00000504693 896 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.4□□□□□ -2.03
SKA3Q8IX90 AC114797.1-201ENST00000514003 728 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 AC106038.2-201ENST00000520706 568 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.4□□□□□ -2.03
SKA3Q8IX90 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.4□□□□□ -2.03
SKA3Q8IX90 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.4□□□□□ -2.03
SKA3Q8IX90 AC109446.2-201ENST00000567872 497 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 LARP7P3-201ENST00000579888 337 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 AL033523.1-201ENST00000605153 153 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 MTND1P37-201ENST00000636562 264 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 AC010149.2-201ENST00000637608 315 ntBASIC2.4□□□□□ -2.03
SKA3Q8IX90 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SKA3Q8IX90 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SKA3Q8IX90 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SKA3Q8IX90 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SKA3Q8IX90 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SKA3Q8IX90 RNA5SP139-201ENST00000364340 117 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 RNY4P16-201ENST00000364768 94 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 RNU6-1180P-201ENST00000364935 107 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 RPL17P12-201ENST00000413391 526 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 BTF3L4P3-201ENST00000418879 476 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 Z99497.1-201ENST00000421282 135 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC099548.1-201ENST00000421443 426 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 ZNF863P-201ENST00000426746 417 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC244035.1-201ENST00000430042 390 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 CETN4P-201ENST00000432407 469 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC010153.1-201ENST00000432862 727 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC112220.1-201ENST00000434628 355 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC105272.1-201ENST00000438604 198 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AL445567.1-201ENST00000439121 144 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC025750.2-201ENST00000442609 450 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC109486.1-201ENST00000486833 374 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC097462.2-201ENST00000504623 481 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC128657.1-201ENST00000549459 145 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 EIF4BP1-201ENST00000554881 351 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 MTND3P12-201ENST00000559068 328 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC135628.1-201ENST00000568867 534 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 KC877982.1-201ENST00000602313 470 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 U73023.1-201ENST00000603134 700 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC008277.2-201ENST00000605196 797 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AL136363.1-201ENST00000605349 337 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC121334.2-201ENST00000605387 271 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC027807.2-201ENST00000616099 408 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 uc_338.12-201ENST00000616344 181 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 AC007494.3-201ENST00000624660 743 ntBASIC2.39□□□□□ -2.03
SKA3Q8IX90 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.39□□□□□ -2.03
SKA3Q8IX90 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SKA3Q8IX90 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
SKA3Q8IX90 OR5J1P-201ENST00000313544 939 ntBASIC2.38□□□□□ -2.03
SKA3Q8IX90 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms