Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 AC010186.2-204ENST00000537668 439 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 CR383656.7-201ENST00000548164 174 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 RN7SL652P-201ENST00000577769 300 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 MIR5696-201ENST00000578474 85 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 LRRC37A5P-203ENST00000580181 585 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 NF1P5-201ENST00000588287 448 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 MIR15A-201ENST00000607334 83 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 AC006329.2-201ENST00000611491 394 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 AC068870.2-201ENST00000620635 389 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 AP002799.1-201ENST00000623552 423 ntBASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.31□□□□□ -1.56
NUCKS1Q9H1E3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AL445487.1-201ENST00000415694 1580 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 Y_RNA.143-201ENST00000363520 106 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 RNU6-1020P-201ENST00000363684 107 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AL592291.1-201ENST00000403830 352 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 RNA5SP494-201ENST00000410653 129 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 RPL31P2-201ENST00000413849 377 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 RPL34P20-201ENST00000442771 351 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 CEACAMP7-201ENST00000444105 496 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 RN7SL329P-201ENST00000467740 299 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 MRPL42P6-201ENST00000486397 371 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 RN7SL97P-201ENST00000486780 299 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 Y_RNA.662-201ENST00000516028 97 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 RAB9BP1-201ENST00000519581 626 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 GSTP1P1-201ENST00000548078 319 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 SNORA74C-1-201ENST00000580726 201 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AL034351.1-201ENST00000605288 668 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 SNORD91B-202ENST00000608459 222 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AL591926.8-201ENST00000616876 211 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AL590240.4-201ENST00000616908 390 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 AC243829.7-201ENST00000633081 225 ntBASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NUCKS1Q9H1E3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 ASNSP1-201ENST00000518311 1939 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 AC139713.2-215ENST00000641428 5037 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 RNA5SP455-201ENST00000365190 119 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 MIR578-201ENST00000384828 96 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 Y_RNA.602-201ENST00000410535 92 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 ISCUP1-201ENST00000454451 448 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 AC133134.1-201ENST00000466800 359 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 COX6CP14-201ENST00000469580 174 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 RN7SL826P-201ENST00000479724 288 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 RPL7P47-201ENST00000497299 556 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 AC007458.1-201ENST00000542812 373 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 FKBP1BP1-201ENST00000553366 325 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 AL442163.3-201ENST00000554110 156 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 MIR4691-201ENST00000583764 85 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 AL078605.1-201ENST00000603529 500 ntBASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.29□□□□□ -1.56
NUCKS1Q9H1E3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 SAGE4P-201ENST00000442271 3381 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 U3.13-201ENST00000364804 214 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 RNY4P28-201ENST00000365281 93 ntBASIC5.28□□□□□ -1.56
NUCKS1Q9H1E3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms