Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC019159.1-201ENST00000605094 187 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AC105129.3-201ENST00000605455 485 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AC092354.1-201ENST00000606057 376 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AC093732.2-201ENST00000607950 274 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 FTX_3.1-201ENST00000610451 147 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AC027807.2-201ENST00000616099 408 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AC006386.2-201ENST00000624491 75 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 AC012005.1-201ENST00000624575 75 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.05□□□□□ -1.92
PDGFRAP16234 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.05□□□□□ -1.92
PDGFRAP16234 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDGFRAP16234 AL365361.1-201ENST00000566942 3481 ntBASIC3.05□□□□□ -1.92
PDGFRAP16234 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.05□□□□□ -1.92
PDGFRAP16234 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFRAP16234 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDGFRAP16234 FTLP6-201ENST00000355274 422 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PDGFRAP16234 RNU1-35P-201ENST00000362782 153 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 Y_RNA.608-201ENST00000410647 95 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 RN7SKP58-201ENST00000411010 305 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 EEF1A1P41-201ENST00000414667 207 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 ZNF90P2-204ENST00000419323 1075 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AL365496.1-201ENST00000426885 215 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 FCF1P1-201ENST00000432690 571 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 MTND1P30-201ENST00000441241 901 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFRAP16234 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFRAP16234 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFRAP16234 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.04□□□□□ -1.92
PDGFRAP16234 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFRAP16234 KATNBL1P6-201ENST00000453433 915 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 RNU7-23P-201ENST00000459465 62 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFRAP16234 RPS29P26-201ENST00000477483 171 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AP000797.1-201ENST00000478870 387 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 RPS3AP14-201ENST00000483907 780 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AC109486.1-201ENST00000486833 374 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AC138853.1-201ENST00000503549 823 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 RAC1P5-201ENST00000512182 576 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AC114797.1-201ENST00000514003 728 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 SCGB1D5P-201ENST00000515134 247 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AC107934.1-201ENST00000522215 217 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 EIF4BP1-201ENST00000554881 351 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 MIR3118-1-201ENST00000581787 76 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AC083760.1-201ENST00000589621 670 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFRAP16234 AL359999.1-201ENST00000604513 294 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.04□□□□□ -1.92
PDGFRAP16234 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDGFRAP16234 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.04□□□□□ -1.92
PDGFRAP16234 AC034102.8-201ENST00000615146 484 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PDGFRAP16234 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDGFRAP16234 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PDGFRAP16234 AC009487.2-201ENST00000420969 6821 ntBASIC3.04□□□□□ -1.92
PDGFRAP16234 AC092104.1-201ENST00000497346 1441 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC008669.1-201ENST00000565823 2178 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 RNU5F-7P-201ENST00000363696 115 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 SNORA51.4-201ENST00000364993 124 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 RNU6-851P-201ENST00000384565 107 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 FO393413.1-201ENST00000402892 195 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDGFRAP16234 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.03□□□□□ -1.92
PDGFRAP16234 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 COTL1P1-201ENST00000422309 375 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 MED14P1-201ENST00000430517 648 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC244505.4-201ENST00000434905 287 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 ARPC3P1-201ENST00000437218 533 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.03□□□□□ -1.92
PDGFRAP16234 AL445567.1-201ENST00000439121 144 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.03□□□□□ -1.92
PDGFRAP16234 AC093156.1-201ENST00000440382 670 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 SSXP5-201ENST00000443473 287 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 DDX3P2-201ENST00000446138 111 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.03□□□□□ -1.92
PDGFRAP16234 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.03□□□□□ -1.92
PDGFRAP16234 SNORA31.3-201ENST00000516029 96 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.03□□□□□ -1.92
PDGFRAP16234 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDGFRAP16234 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PDGFRAP16234 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.03□□□□□ -1.92
PDGFRAP16234 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.03□□□□□ -1.92
PDGFRAP16234 ROCK1P1-201ENST00000573767 549 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 MIR3915-201ENST00000578518 97 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.03□□□□□ -1.92
PDGFRAP16234 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.03□□□□□ -1.92
PDGFRAP16234 U73023.1-201ENST00000603134 700 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.03□□□□□ -1.92
PDGFRAP16234 AC138749.5-201ENST00000611461 208 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC004852.3-201ENST00000614131 326 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC116165.2-201ENST00000616705 206 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC092140.2-201ENST00000618027 521 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC009878.1-201ENST00000621819 340 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 AC068057.2-201ENST00000624047 895 ntBASIC3.03□□□□□ -1.92
PDGFRAP16234 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.03□□□□□ -1.93
PDGFRAP16234 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms