Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cx3cr1Q9Z0D9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Cx3cr1Q9Z0D9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cx3cr1Q9Z0D9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Cx3cr1Q9Z0D9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cx3cr1Q9Z0D9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cx3cr1Q9Z0D9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm7638-201ENSMUST00000121348 967 ntBASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cx3cr1Q9Z0D9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms