Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx6Q9R1R0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Gm10478-201ENSMUST00000084451 396 ntBASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx6Q9R1R0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Gm4995-201ENSMUST00000117247 432 ntBASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.28■□□□□ 0.04
Lhx6Q9R1R0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Gm22709-201ENSMUST00000116893 111 ntBASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Gm14579-201ENSMUST00000117068 283 ntBASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Gm43275-201ENSMUST00000202053 1020 ntBASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 AC173345.3-201ENSMUST00000221245 1093 ntBASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lhx6Q9R1R0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx6Q9R1R0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx6Q9R1R0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx6Q9R1R0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx6Q9R1R0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx6Q9R1R0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Lhx6Q9R1R0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx6Q9R1R0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx6Q9R1R0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lhx6Q9R1R0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Gm25026-201ENSMUST00000175017 188 ntBASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Gm18595-201ENSMUST00000175736 1068 ntBASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 AC129597.1-201ENSMUST00000223046 1234 ntBASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lhx6Q9R1R0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms