Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.23□□□□□ -0.13
Nubp1Q9R060 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.22□□□□□ -0.13
Nubp1Q9R060 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC14.22□□□□□ -0.13
Nubp1Q9R060 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nubp1Q9R060 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nubp1Q9R060 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.21□□□□□ -0.13
Nubp1Q9R060 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.21□□□□□ -0.13
Nubp1Q9R060 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Gm37436-201ENSMUST00000193842 1085 ntBASIC14.21□□□□□ -0.13
Nubp1Q9R060 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nubp1Q9R060 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nubp1Q9R060 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nubp1Q9R060 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nubp1Q9R060 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.21□□□□□ -0.14
Nubp1Q9R060 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.21□□□□□ -0.14
Nubp1Q9R060 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nubp1Q9R060 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Gm27000-201ENSMUST00000182943 842 ntBASIC14.2□□□□□ -0.14
Nubp1Q9R060 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Gm27867-201ENSMUST00000184778 125 ntBASIC14.2□□□□□ -0.14
Nubp1Q9R060 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Gm18351-201ENSMUST00000188646 883 ntBASIC14.2□□□□□ -0.14
Nubp1Q9R060 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.2□□□□□ -0.14
Nubp1Q9R060 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Gm14667-201ENSMUST00000119448 1350 ntBASIC14.2□□□□□ -0.14
Nubp1Q9R060 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.2□□□□□ -0.14
Nubp1Q9R060 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nubp1Q9R060 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Nubp1Q9R060 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms