Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Gm20760-201ENSMUST00000179197 648 ntBASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Rpf2Q9JJ80 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpf2Q9JJ80 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Gm27463-201ENSMUST00000183569 57 ntBASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Gm7370-201ENSMUST00000219471 767 ntBASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpf2Q9JJ80 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.27■□□□□ 0.35
Rpf2Q9JJ80 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Gm13168-201ENSMUST00000121771 632 ntBASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpf2Q9JJ80 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpf2Q9JJ80 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.25■□□□□ 0.35
Rpf2Q9JJ80 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rpf2Q9JJ80 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpf2Q9JJ80 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpf2Q9JJ80 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpf2Q9JJ80 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rpf2Q9JJ80 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms