Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Copb1Q9JIF7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Copb1Q9JIF7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Copb1Q9JIF7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Gm11336-201ENSMUST00000118168 334 ntBASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Gm16061-201ENSMUST00000122167 857 ntBASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Gm2274-201ENSMUST00000184539 609 ntBASIC17.8■□□□□ 0.44
Copb1Q9JIF7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Gm7213-201ENSMUST00000215977 950 ntBASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Gm30025-201ENSMUST00000218555 728 ntBASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Prob1-201ENSMUST00000097619 3021 ntBASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Copb1Q9JIF7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Copb1Q9JIF7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Gm13474-201ENSMUST00000122466 815 ntBASIC17.78■□□□□ 0.44
Copb1Q9JIF7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Copb1Q9JIF7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Copb1Q9JIF7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms